research library subject archive
A growing collection of key research and review articles, categorized by subject. The collection includes articles from PSI research groups and the broader community.
Articles by PSI 2010
Homologue structure of the SLAC1 anion channel for closing stomata in leaves
Chen Y.H., Hu L., Punta M., Bruni R., Hillerich B.
Nature 467, 1074 - 1080 (2010)
The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu
Das D., Finn R.D., Abdubek P., Astakhova T., Axelrod H.L.
Protein Sci 19, 2131 - 2140 (2010)
Novel α-glucosidase from human gut microbiome: substrate specificities and their switch
Tan K., Tesar C., Wilton R., Keigher L., Babnigg G. et al.
FASEB J 24, 3939 - 3949 (2010)
High-throughput expression and purification of membrane proteins
Mancia F. and Love J.
J Struc Biol 172, 85 - 93 (2010)
Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases
Tchigvintsev A., Xu X., Singer A., Chang C., Brown G.
J Mol Biol. 402, 524 - 538 (2010)
Engineering of a wheat germ expression system to provide compatibility with a high throughput pET-based cloning platform
Zhao L., Zhao K., Hurst R., Slater M., Acton T. et al.
J Struc Funct Genomics 11, 201 - 209 (2010)
To automate or not to automate: this is the question
Cymborowski M., Klimecka M., Chruszcz M., Zimmerman M., Shumilin I. et al.
J Struc Funct Genomics 11, 211 - 221 (2010)
The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins
Love J., Mancia F., Shapiro L., Punta M., Rost B. et al.
J Struc Funct Genomics 11, 191 - 199 (2010)
Substrate and drug binding sites in LeuT
Nyola A., Karpowich N.K., Zhen J., Marden J., Reith M.E.
Curr Opin Struct Biol 20, 415 - 422 (2010)
SARS coronavirus unique domain: three-domain molecular architecture in solution and RNA binding
Johnson M., Chatterjee A., Neuman B. and Wüthrich K.
J Mol Biol 400, 724 - 742 (2010)
A comprehensive analysis of structural and sequence conservation in the TetR family transcriptional regulators
Yu Z., Reichheld S.E., Savchenko A., Parkinson J., Davidson A.R.
J Mol Biol 400, 847 - 864 (2010)
Dead-end filling of SlipChip evaluated theoretically and experimentally as a function of the surface chemistry and the gap size between the plates for lubricated and dry SlipChips
Li L., Karymov M.A., Nichols K.P., Ismagilov R.F.
Langmuir. 26, 12465 - 12471 (2010)
TM0486 from the hyperthermophilic anaerobe Thermotoga maritima is a thiamin-binding protein involved in response of the cell to oxidative conditions
Dermoun Z., Foulon A., Miller M., Harrington D., Deacon A. et al.
J Mol Biol 400, 463 - 476 (2010)
Molecular mechanism of MLL PHD3 and RNA recognition by the Cyp33 RRM domain
Hom R.A., Chang P.Y., Roy S., Musselman C.A., Glass K.C.
J Mol Biol 400, 145 - 154 (2010)
Structure and activity of the metal-independent fructose-1,6-bisphosphatase YK23 from Saccharomyces cerevisiae
Kuznetsova E., Xu L., Singer A., Brown G., Dong A. et al.
J Biol Chem 285, 21049 - 21059 (2010)
Expansion of the protein repertoire in newly explored environments: human gut microbiome specific protein families
Ellrott K., Jaroszewski L., Li W., Wooley J. and Godzik A.
PLoS Comp Biol 6, e1000798 (2010)
NMR method for measuring carbon-13 isotopic enrichment of metabolites in complex solutions
Lewis I., Karsten R., Norton M., Tonelli M., Westler W. et al.
Anal Chem 82, 4558 - 4563 (2010)
Purification of transmembrane proteins from Saccharomyces cerevisiae for X-ray crystallography
Clark K.M., Fedoriw N., Robinson K., Connelly S.M., Randles J.
Protein Expr Purif 71, 207 - 223 (2010)
Discovery and structure determination of the orphan enzyme isoxanthopterin deaminase
Hall R., Agarwal R., Hitchcock D., Sauder J., Burley S. et al.
Biochemistry 49, 4374 - 4382 (2010)
New surface contacts formed upon reductive lysine methylation: improving the probability of protein crystallization
Sledz P., Zheng H., Murzyn K., Chruszcz M., Zimmerman M.D.
Protein Sci 19, 1395 - 1404 (2010)
Heme proteins--diversity in structural characteristics, function, and folding
Smith L.J., Kahraman A., Thornton J.M.
Proteins 78, 2349 - 2368 (2010)
Solution NMR structure of Lin0431 protein from Listeria innocua reveals high structural similarity with domain II of bacterial transcription antitermination protein NusG
Tang Y., Xiao R., Ciccosanti C., Janjua H., Lee D. et al.
Proteins 78, 2563 - 2568 (2010)
ArchSchema: a tool for interactive graphing of related Pfam domain architectures
Tamuri A.U., Laskowski R.A.
Bioinformatics 26, 1260 - 1261 (2010)
Structural basis of O6-alkylguanine recognition by a bacterial alkyltransferase-like DNA repair protein
Aramini J., Tubbs J., Kanugula S., Rossi P., Ertekin A. et al.
J Biol Chem 285, 13736 - 13741 (2010)
Structure of a virulence regulatory factor CvfB reveals a novel winged helix RNA binding module.
Matsumoto Y., Xu Q., Miyazaki S., Kaito C., Farr C. et al.
Structure 18, 537 - 547 (2010)
Protein crystallization analysis on the World Community Grid
Cumbaa C.A., Jurisica I
J Struct Funct Genomics 11, 61 - 69 (2010)
X-ray structure determination of the glycine cleavage system protein H of Mycobacterium tuberculosis using an inverse Compton synchrotron X-ray source
Abendroth J., McCormick M.S., Edwards T.E., Staker B., Loewen R.
J Struct Funct Genomics 11, 91 - 100 (2010)
The structure of DinB from Geobacillus stearothermophilus: a representative of a unique four-helix-bundle superfamily
Cooper D.R., Grelewska K., Kim C.Y., Joachimiak A., Derewenda Z.S.
Acta Crystallogr Sect F Struct Biol Cryst Commun 66, 219 - 224 (2010)
Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum
Luo H.B., Zheng H., Zimmerman M.D., Chruszcz M., Skarina T.
J Struct Biol 169, 304 - 311 (2010)
Visualization of macromolecular structures
O'Donoghue S.I., Goodsell D.S., Frangakis A.S., Jossinet F., Laskowski R.A.
Nat Methods 7, S42 - 55 (2010)
Structure of bovine pancreatic ribonuclease complexed with uridine 5'-monophosphate at 1.60 A resolution
Larson S.B., Day J.S., Nguyen C., Cudney R., McPherson A.
Acta Crystallogr Sect F Struct Biol Cryst Commun 66, 113 - 120 (2010)
TOPSAN: a collaborative annotation environment for structural genomics
Weekes D., Krishna S.S., Bakolitsa C., Wilson I.A., Godzik A.
BMC Bioinformatics. 11, 426 (2010)
Rapid, robotic, small-scale protein production for NMR screening and structure determination
Jensen D., Woytovich C., Li M., Duvnjak P., Cassidy M. et al.
Prot Sci 19, 570 - 578 (2010)
Crystal structure of an eIF4G-like protein from Danio rerio
Bae E., Bitto E., Bingman C., McCoy J., Wesenberg G. et al.
Proteins 78, 1803 - 1806 (2010)
Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145
Sampathkumar P., Ozyurt S., Do J., Bain K., Dickey M. et al.
Proteins 78, 1992 - 1998 (2010)
